CDS
| Accession Number | TCMCG006C11847 |
| gbkey | CDS |
| Protein Id | XP_022564793.1 |
| Location | complement(join(30138109..30138852,30138929..30139165,30139242..30139353,30139468..30139757,30139826..30140038,30140119..30140665,30140743..30140821,30140949..30140961)) |
| Gene | LOC106414224 |
| GeneID | 106414224 |
| Organism | Brassica napus |
Protein
| Length | 744aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022709072.1 |
| Definition | cyclic nucleotide-gated ion channel 1-like isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | PT |
| Description | cyclic nucleotide-gated ion channel |
| KEGG_TC | 1.A.1.5 |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko04040 [VIEW IN KEGG] |
| KEGG_ko |
ko:K05391
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04626
[VIEW IN KEGG] map04626 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0005887 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0016021 [VIEW IN EMBL-EBI] GO:0031224 [VIEW IN EMBL-EBI] GO:0031226 [VIEW IN EMBL-EBI] GO:0042391 [VIEW IN EMBL-EBI] GO:0044425 [VIEW IN EMBL-EBI] GO:0044459 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0065007 [VIEW IN EMBL-EBI] GO:0065008 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCCGAGTTCGGGTTTTGCATTTTCCTCACACCAAGTTGTGCATCAACAAACTCTCCAACAATGAATTTTCGACCAGATAAGTCCGTTAGGTTTCACGACTGGAAATCCGACAAGGCTTCCGACGTGGAATACTCCGAGAGAACCGAGGTTCCAGATGGTTTATTCCGGAGGGCAATAAGCTCAATCTCAGACAAGTTACACGGATGCTTCTTAAGGATCAAAATGTTCAGGAGGTCTTACTCTTTGAAAGAAACGGTTTCGAAAGGGATTGATTCCACTCACGAGATACTTGACCCACAAGGATCTTTCCTTCAGAAGTGGAACAAGATCTTCGTTTTAGCTTGTATCGTCGCTGTCTCCGTCGACCCTTTGTTCTTCTACGTACCTGTCCTCGACAAGGCCAAGAACTGTCTTGATGTCGACAAGAAAATGCAGACAACCGCAAGCGTATTGCGCTCCATCACCGACATCTTCTACGCCATTCACATGGTTTTCCAGTTCCGTACGGGCTTCATCGCTCCTTCTTCTCGTGTCTTTGGGAGAGGTGTTCTTGTTGAGAACAGGCGCGAGATCGCTAAACGTTACTTGTCCTCTCATTTCATCGTCGACATTCTTGCCGTGCTTCCTCTTCCTCAGATGGTGATTTCGATAATCATTCCGAGTATGAGAGAGCCCAAGACTTTGCACACGAAGAATATGTTGAAGTTCATAGTCTTCTTCCAATACATACCGAGGTTTATGAGAATCTATCCGCTCTATAAGCAAGTGACTAGAACCTCAGGCATACTTACAGAGACAGCTTGGGCAGGAGCTGCTTTTAACCTCTTCCTCTACATGCTTGCTAGTCATGTGTTTGGTGCTTTCTGGTATTTGTTCTCTATCGAGCGCAAAACCGTGTGCTGGAAGCAAGCTTGCGAGAGAGACAGGAGGATCTGCGAAATAGATTCGTTGTATTGTAGGGAGCCTCCCACTTTTGGAGACAACACTTTTCTCAATGCGTCTTGTCCGGTTCTGGAATGTAACGCAACACGTTTCGAGTTTGGGATATTCCTTGGCGCACTTCAGTCCGGTGTGGTGGAGTCTCATGATTTCCCTCTGAAGTTCTTTTACTGTTTCTGGTGGGGTCTCCAAAACCTCAGTTCGCTGGGACAAAACCTTAAAACAAGTACATACATATGGGAGAACTGTTTCGCGGTCTTCATTTCTATCTCCGGACTGGTTCTCTTCTCGTTCTTGATCGGGAACATGCAGACGTATCTGCAATCAACAACCACAAGGCTGGAGGAGATGAGAGTCAAGAGAAGAGACGCTGAACAATGGATGTCTCACCGTTTGCTCCCCGACAATCTAAGGAAAAGAATCCGACGATACGAGCAGTACAAATGGCAAGAGACCAGAGGCGTTAATGAAGAGAATCTTCTTCGTAACCTCCCTAAAGATCTTAGACGCGACATTAAACGCCATCTCTGTCTCGCCCTTGTCATGCGTGTCCCTATGTTTGAGCAAATGGACGAGCAGCTTCTTGATGCTCTGTGTGACCGTCTGCAACCTGTGCTGTACACAGAGGAAAGCTACATCGTCAGAGAAGGAGATCCTGTAGATGAAATGCTCTTCATAATGCGTGGGAAGCTTCTAACAATGACAACAAACGGTGGAAGAACCGGTTTCTTCAACTCCGAGCATCTCGGAGCTGGTGATTTCTGCGGAGAGGAGCTTCTAACCTGGGCTTTAGACCCACACACATCCACAAACCTCCCAATCTCGACAAGAACCGTTCAAGCTCTCGTGGAAGTCGAAGCCTTCGCACTCAAAGCAGACAACCTCAAATTCGTGGCTTCTCAGTTCAGACGTCTCCACAGCAAACAGCTGAGACATACTTTCAGATTCTACTCGCAGCAATGGAGGACTTGGGCTGCTTGCTTCATACAAGCCTTTTGGAGAAGATGCGTGAAGAAGAGACTAGAGGAGACTCTTAGACAAGAAGAGAACCGGTTGCAGGACGCTTTGGCTAAAGAAGCTTGTGGAAGCTCACCGAGCTTTGGTGCTACGATGTACGCGTCACGGTTTGCTGCAAACATCTTGCGGACTATACGAAGGAGCGGTTCGGTGCGTAAACCGAGGATGCTGGAACGAATGCCACCTATGCTACTACTTCAGAAACCAGCTGAACCGGATTTCAATAGTGATGATTATATGCGTATAGTGCCGATATATAAAAATAGAAGTCTTTAA |
| Protein: MSEFGFCIFLTPSCASTNSPTMNFRPDKSVRFHDWKSDKASDVEYSERTEVPDGLFRRAISSISDKLHGCFLRIKMFRRSYSLKETVSKGIDSTHEILDPQGSFLQKWNKIFVLACIVAVSVDPLFFYVPVLDKAKNCLDVDKKMQTTASVLRSITDIFYAIHMVFQFRTGFIAPSSRVFGRGVLVENRREIAKRYLSSHFIVDILAVLPLPQMVISIIIPSMREPKTLHTKNMLKFIVFFQYIPRFMRIYPLYKQVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERKTVCWKQACERDRRICEIDSLYCREPPTFGDNTFLNASCPVLECNATRFEFGIFLGALQSGVVESHDFPLKFFYCFWWGLQNLSSLGQNLKTSTYIWENCFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDNLRKRIRRYEQYKWQETRGVNEENLLRNLPKDLRRDIKRHLCLALVMRVPMFEQMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEHLGAGDFCGEELLTWALDPHTSTNLPISTRTVQALVEVEAFALKADNLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAFWRRCVKKRLEETLRQEENRLQDALAKEACGSSPSFGATMYASRFAANILRTIRRSGSVRKPRMLERMPPMLLLQKPAEPDFNSDDYMRIVPIYKNRSL |